Sequence Similarity Clusters for the Entities in PDB 5XXT

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q
Tubulin alpha-1A chain protein, length: 438 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 456
95 % 180 257 13
90 % 180 258 15
70 % 189 274 13
50 % 189 274 18
40 % 378 548 3
30 % 387 559 8
Entity #2 | Chains: B,D,F,H,J,L,N,P,R
Tubulin beta chain protein, length: 426 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 104 57
95 % 179 253 14
90 % 187 266 8
70 % 190 274 12
50 % 190 274 16
40 % 379 548 3
30 % 388 559 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures