Sequence Similarity Clusters for the Entities in PDB 5XDN

Entity #1 | Chains: A,B
Voltage-dependent anion-selective channel protein 1 protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 5624
95 % 6 11 4807 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.4
PDBFlex
90 % 6 11 4872
70 % 7 12 4577
50 % 7 12 4465
40 % 7 12 4373
30 % 7 12 4268

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures