Sequence Similarity Clusters for the Entities in PDB 5WPA

Entity #1 | Chains: A
Splicing factor, proline- and glutamine-rich protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 14534
95 % 4 4 14780 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.9
PDBFlex
90 % 4 4 14562
70 % 6 9 3481
50 % 6 9 3428
40 % 6 10 3128
30 % 6 10 3094
Entity #2 | Chains: B
Paraspeckle component 1 protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 24307
95 % 2 3 24267 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.1
PDBFlex
90 % 2 3 23530
70 % 7 9 3481
50 % 7 9 3428
40 % 7 10 3128
30 % 7 10 3094

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures