Sequence Similarity Clusters for the Entities in PDB 5VMA

Entity #1 | Chains: A
Glycoside hydrolase protein, length: 709 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 32537
95 % 1 3 28925 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 3 27888
70 % 1 3 25231
50 % 1 3 22149
40 % 9 25 2150
30 % 9 25 2157

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures