Sequence Similarity Clusters for the Entities in PDB 5UFQ

Entity #1 | Chains: A,B
GTPase KRas protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 32339
95 % 105 135 138 Flexibility: Low
Max RMSD: 7.7, Avg RMSD: 1.3
PDBFlex
90 % 122 170 228
70 % 243 325 67
50 % 269 369 77
40 % 269 369 93
30 % 383 584 25
Entity #2 | Chains: C,D
R11.1.6 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32338
95 % 1 2 27105 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 1 2 26162
70 % 15 26 2487
50 % 15 26 2488
40 % 15 26 2556
30 % 15 26 2533

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures