Sequence Similarity Clusters for the Entities in PDB 5UFJ

Entity #1 | Chains: A,C
Hemoglobin subunit alpha protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 129 219 43
95 % 156 256 40 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 157 257 44
70 % 188 340 22
50 % 417 735 7
40 % 417 735 7
30 % 452 783 10
Entity #2 | Chains: B,D
Hemoglobin subunit beta protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 3083
95 % 164 257 35 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 167 262 38
70 % 203 353 17
50 % 418 735 7
40 % 418 735 7
30 % 453 783 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures