Sequence Similarity Clusters for the Entities in PDB 5U9M

Entity #1 | Chains: A,C
Superoxide dismutase [Cu-Zn] protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 4846
95 % 68 92 73 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.7
PDBFlex
90 % 68 92 77
70 % 94 120 70
50 % 126 159 71
40 % 127 160 87
30 % 146 185 69
Entity #2 | Chains: B,D
Superoxide dismutase 1 copper chaperone protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35061
95 % 1 2 17691 Flexibility: Medium
Max RMSD: 6.6, Avg RMSD: 4.6
PDBFlex
90 % 1 2 17380
70 % 1 2 16221
50 % 1 2 14597
40 % 1 2 13574
30 % 1 2 12336

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures