Sequence Similarity Clusters for the Entities in PDB 5U45

Entity #1 | Chains: A,B
Peroxisome proliferator-activated receptor delta protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 36 572
95 % 12 42 650 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.0
PDBFlex
90 % 12 42 681
70 % 15 60 481
50 % 31 223 119
40 % 31 223 139
30 % 117 639 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures