Sequence Similarity Clusters for the Entities in PDB 5TXZ

Entity #1 | Chains: A
DNA-directed DNA/RNA polymerase mu protein, length: 356 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 37 1408
95 % 14 67 954 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.5
PDBFlex
90 % 14 67 990
70 % 14 68 987
50 % 14 68 1034
40 % 14 68 1077
30 % 14 506 100
Entity #2 | Chains: T
DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3') dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
DNA (5'-D(*CP*GP*TP*AP*T)-3') dna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
DNA (5'-D(P*GP*CP*CP*G)-3') dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5VZA 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
2 5VZB 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
3 5VZI 1 A DNA-directed DNA/RNA polymerase mu UNP residues 134-494 9606 2.7.7.7 | Details
4 5VZE 1 A DNA-directed DNA/RNA polymerase mu UNP residues 134-494 9606 2.7.7.7 | Details
5 5VZC 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
6 5VZ7 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
7 6P1N 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
8 5VZD 1 A DNA-directed DNA/RNA polymerase mu UNP residues 134-494 9606 2.7.7.7 | Details
9 5VZ8 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
10 4LZG 1 A DNA-directed DNA/RNA polymerase mu Polymerase Mu Loop2 deletion variant, UNP residues 132-494 9606 2.7.7.7 | Details
11 5VZ9 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
12 6IPG 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
13 6P1M 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
14 5TXZ 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
15 6P1O 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
16 5VZF 1 A DNA-directed DNA/RNA polymerase mu UNP residues 134-494 9606 2.7.7.7 | Details
17 5TYG 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
18 6P1T 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
19 6IPH 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
20 6IPN 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
21 6IPE 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
22 6P1R 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
23 4YD1 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
24 6P1W 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
25 6AKH 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
26 6P1P 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
27 6IPL 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
28 6P1U 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
29 6IPD 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
30 6AEH 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
31 6AK8 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
32 6P1S 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
33 6AEC 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
34 5TWQ 1 A human DNA Polymerase Mu residues 134-494 9606 2.7.7.7 | Details
35 6AK5 1 A DNA-directed DNA/RNA polymerase mu deletions 398-410 9606 2.7.7.7 | Details
36 4M0A 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
37 6IPF 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
38 6IPM 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
39 5TYB 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
40 5TWS 1 A human DNA Polymerase Mu 9606 2.7.7.7 | Details
41 5VZG 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
42 6AK6 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
43 5TWR 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
44 4M04 1 A DNA-directed DNA/RNA polymerase mu Polymerase Mu Loop2 deletion variant, UNP residues 132-494 9606 2.7.7.7 | Details
45 6IPI 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
46 4LZD 1 A DNA-directed DNA/RNA polymerase mu Polymerase Mu Loop2 deletion variant, UNP residues 132-494 9606 2.7.7.7 | Details
47 6AK9 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
48 6P1Q 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
49 5TYD 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
50 5TYW 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
51 5TXX 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
52 6P1V 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
53 5VZH 1 A DNA-directed DNA/RNA polymerase mu UNP residues 134-494 9606 2.7.7.7 | Details
54 5TYF 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
55 5TYY 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
56 5TYZ 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
57 5TYV 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
58 5TYX 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
59 5TWP 1 A DNA-directed DNA/RNA polymerase mu residues 134-494 9606 2.7.7.7 | Details
60 6IPJ 1 A DNA-directed DNA/RNA polymerase mu,DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
61 5TYE 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
62 5TYU 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
63 5ZLC 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
64 5TYC 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
65 4YCX 1 A DNA-directed DNA/RNA polymerase mu unp residues 134-494 9606 2.7.7.7 | Details
66 6IPK 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
67 4YD2 1 A DNA-directed DNA/RNA polymerase mu unp residues 134-494 9606 2.7.7.7 | Details
68 2IHM 4 A, B DNA polymerase mu catalytic domain 10090 2.7.7.7 | Details