Sequence Similarity Clusters for the Entities in PDB 5TXZ

Entity #1 | Chains: A
DNA-directed DNA/RNA polymerase mu protein, length: 356 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 37 1408
95 % 14 67 956 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.5
PDBFlex
90 % 14 67 997
70 % 14 68 983
50 % 14 68 1027
40 % 14 68 1057
30 % 14 506 98
Entity #2 | Chains: T
DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3') dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
DNA (5'-D(*CP*GP*TP*AP*T)-3') dna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
DNA (5'-D(P*GP*CP*CP*G)-3') dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4LZG 1 A DNA-directed DNA/RNA polymerase mu Polymerase Mu Loop2 deletion variant, UNP residues 132-494 9606 2.7.7.7 | Details
2 6IPG 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
3 5TXZ 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
4 5TYG 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
5 6IPH 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
6 6IPN 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
7 6IPE 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
8 6AKH 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
9 6IPL 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
10 6IPD 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
11 6AEH 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
12 6AK8 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
13 6AEC 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
14 6AK5 1 A DNA-directed DNA/RNA polymerase mu deletions 398-410 9606 2.7.7.7 | Details
15 4M0A 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
16 6IPF 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
17 6IPM 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
18 5TYB 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
19 6AK6 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
20 4M04 1 A DNA-directed DNA/RNA polymerase mu Polymerase Mu Loop2 deletion variant, UNP residues 132-494 9606 2.7.7.7 | Details
21 6IPI 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
22 4LZD 1 A DNA-directed DNA/RNA polymerase mu Polymerase Mu Loop2 deletion variant, UNP residues 132-494 9606 2.7.7.7 | Details
23 6AK9 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
24 5TYD 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
25 5TYW 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
26 5TXX 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
27 5TYF 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
28 5TYY 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
29 5TYZ 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
30 5TYV 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
31 5TYX 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
32 6IPJ 1 A DNA-directed DNA/RNA polymerase mu,DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
33 5TYE 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
34 5TYU 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
35 5ZLC 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details
36 5TYC 1 A DNA-directed DNA/RNA polymerase mu UNP residues 132-494 9606 2.7.7.7 | Details
37 6IPK 1 A DNA-directed DNA/RNA polymerase mu 9606 2.7.7.7 | Details