5TSX

HIV-1 CA hexamer with NUP153 peptide - P1 crystal form


Sequence Similarity Clusters for the Entities in PDB 5TSX

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
HIV-1 CA protein protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 18 496
95 % 3 83 1
90 % 3 84 1
70 % 3 78 3
50 % 3 78 2
40 % 3 78 2
30 % 3 78 4
Entity #2 | Chains: M,N,O,P,R,T
Nuclear pore complex protein Nup153 protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 13952
95 % 1 2 13774
90 % 1 2 13301
70 % 1 2 12861
50 % 1 2 11737
40 % 1 2 10844
30 % 1 2 10003

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures