5TSV

HIV-1 CA hexamer with NUP153 peptide - R3 crystal form


Sequence Similarity Clusters for the Entities in PDB 5TSV

Entity #1 | Chains: A,B
HIV-1 CA protein protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 18 501
95 % 33 83 1
90 % 33 84 1
70 % 33 78 3
50 % 33 78 3
40 % 33 78 3
30 % 33 78 4
Entity #2 | Chains: D
Nuclear pore complex protein Nup153 protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 14037
95 % 2 2 13797
90 % 2 2 13342
70 % 2 2 12639
50 % 2 2 11543
40 % 2 2 10846
30 % 2 2 10021

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures