Sequence Similarity Clusters for the Entities in PDB 5T9R

Entity #1 | Chains: A,F,H,J
Peptidyl-prolyl cis-trans isomerase FKBP1B protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 35 278
95 % 33 37 344
90 % 33 37 366
70 % 75 92 244
50 % 89 106 207
40 % 89 106 222
30 % 89 106 233
Entity #2 | Chains: B,E,G,I
Ryanodine receptor 1 protein, length: 4676 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 3221
95 % 3 5 3857
90 % 23 27 514
70 % 5 13 1326
50 % 13 25 640
40 % 13 25 669
30 % 13 25 707

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures