Sequence Similarity Clusters for the Entities in PDB 5T0Q

Entity #1 | Chains: A
Transcription factor MYC3 protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 15395
95 % 3 5 14722 Flexibility: Medium
Max RMSD: 7.6, Avg RMSD: 4.2
PDBFlex
90 % 3 5 14491
70 % 3 5 13711
50 % 3 5 12459
40 % 3 5 11614
30 % 3 5 10636
Entity #2 | Chains: B
Protein TIFY 9 protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63504
95 % 1 1 46527
90 % 1 1 44129
70 % 1 1 38967
50 % 1 1 33741
40 % 1 1 30472
30 % 1 1 26928

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures