Sequence Similarity Clusters for the Entities in PDB 5SZH

Entity #1 | Chains: A
MICAL C-terminal-like protein protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 21141
95 % 1 4 20138 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.4
PDBFlex
90 % 1 4 19653
70 % 1 4 18213
50 % 1 5 11706
40 % 1 7 9692
30 % 1 7 8978
Entity #2 | Chains: B
Ras-related protein Rab-1B protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 84536
95 % 1 2 30824 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 6 19 1686
70 % 10 24 1429
50 % 47 109 267
40 % 85 166 179
30 % 405 647 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures