Sequence Similarity Clusters for the Entities in PDB 5Q1E

Entity #1 | Chains: A
Bile acid receptor protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 45 523
95 % 7 81 382 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 1.8
PDBFlex
90 % 7 83 378
70 % 7 83 421
50 % 7 83 468
40 % 7 83 496
30 % 7 83 522
Entity #2 | Chains: B
COACTIVATOR PEPTIDE SRC-1 HD3 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures