Sequence Similarity Clusters for the Entities in PDB 5PYN

Entity #1 | Chains: A,B
Nuclear autoantigen Sp-100 protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 112 119 112
95 % 113 121 146 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.0
PDBFlex
90 % 113 121 159
70 % 113 121 177
50 % 113 121 207
40 % 113 121 220
30 % 127 138 202

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures