Sequence Similarity Clusters for the Entities in PDB 5PNL

Entity #1 | Chains: A
Lysine-specific demethylase 4D protein, length: 364 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 166 273 107
95 % 166 274 140 Flexibility: No
Max RMSD: 4.8, Avg RMSD: 0.3
PDBFlex
90 % 166 274 144
70 % 166 275 162
50 % 166 356 94
40 % 166 356 108
30 % 166 356 111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures