Sequence Similarity Clusters for the Entities in PDB 5PL1

Entity #1 | Chains: A
Lysine-specific demethylase 4D protein, length: 364 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 148 273 105
95 % 148 274 138 Flexibility: No
Max RMSD: 4.8, Avg RMSD: 0.3
PDBFlex
90 % 148 274 144
70 % 148 275 162
50 % 148 356 93
40 % 148 356 106
30 % 148 356 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures