Sequence Similarity Clusters for the Entities in PDB 5PJO

Entity #1 | Chains: A
Lysine-specific demethylase 4D protein, length: 364 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 106 273 107
95 % 106 274 140 Flexibility: No
Max RMSD: 4.8, Avg RMSD: 0.3
PDBFlex
90 % 106 274 144
70 % 106 275 162
50 % 106 356 94
40 % 106 356 108
30 % 106 356 111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures