Sequence Similarity Clusters for the Entities in PDB 5PIX

Entity #1 | Chains: A
Lysine-specific demethylase 4D protein, length: 364 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 93 273 105
95 % 93 274 138 Flexibility: No
Max RMSD: 4.8, Avg RMSD: 0.3
PDBFlex
90 % 93 274 144
70 % 93 275 162
50 % 93 356 93
40 % 93 356 106
30 % 93 356 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures