Sequence Similarity Clusters for the Entities in PDB 5PF1

Entity #1 | Chains: A
Bromodomain adjacent to zinc finger domain protein 2B protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 134 199 165
95 % 134 199 217 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.1
PDBFlex
90 % 134 199 230
70 % 134 199 250
50 % 134 199 280
40 % 135 203 275
30 % 346 475 93

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures