Sequence Similarity Clusters for the Entities in PDB 5OYI

Entity #1 | Chains: 1,A,D,G,J
Genome polyprotein protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 16822
95 % 1 2 12776
90 % 1 2 12643
70 % 1 2 12037
50 % 1 2 11020
40 % 1 2 10359
30 % 1 2 9546
Entity #2 | Chains: 2,B,E,H,K
Genome polyprotein protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15943
95 % 1 2 13048
90 % 1 2 12898
70 % 1 2 12259
50 % 1 2 11202
40 % 1 2 10525
30 % 1 2 9673
Entity #3 | Chains: 3,C,F,I,L
Genome polyprotein protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 10377
95 % 3 4 10568
90 % 7 8 6706
70 % 13 22 2766
50 % 14 24 2508
40 % 17 29 421
30 % 164 256 125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures