Sequence Similarity Clusters for the Entities in PDB 5OXX

Entity #1 | Chains: A
NEQ068 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14638
95 % 2 3 12912 Flexibility: Medium
Max RMSD: 11.6, Avg RMSD: 4.8
PDBFlex
90 % 2 3 12692
70 % 2 3 14206
50 % 2 3 12727
40 % 2 3 11972
30 % 2 3 10848
Entity #2 | Chains: B
NEQ528 protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 52229
95 % 2 2 39523 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 37688
70 % 2 2 33564
50 % 2 2 29165
40 % 2 2 26393
30 % 2 2 23370

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures