Sequence Similarity Clusters for the Entities in PDB 5O33

Entity #1 | Chains: A
Ras-related C3 botulinum toxin substrate 1 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 12 2564
95 % 3 31 1017 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.4
PDBFlex
90 % 3 41 722
70 % 3 84 346
50 % 14 140 205
40 % 14 141 213
30 % 14 141 223
Entity #2 | Chains: B
Kalirin protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 40383
95 % 1 2 29328
90 % 1 2 28245
70 % 1 2 27825
50 % 1 2 22529
40 % 1 2 20551
30 % 1 2 18402

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures