Sequence Similarity Clusters for the Entities in PDB 5NOG

Entity #1 | Chains: A,B,C,D,E
Cardiac muscle alpha actin 1 protein, length: 367 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 4555
95 % 127 169 14
90 % 171 221 10
70 % 194 246 15
50 % 199 253 18
40 % 219 273 23
30 % 240 294 29
Entity #2 | Chains: F,G
cardiac alpha tropomyosin protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures