Sequence Similarity Clusters for the Entities in PDB 5NIY

Entity #1 | Chains: A
Signal recognition particle-docking protein FtsY protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 10 3989
95 % 2 12 3815 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.4
PDBFlex
90 % 2 12 3912
70 % 2 12 3846
50 % 2 22 1861
40 % 3 31 1303
30 % 8 59 660

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures