Sequence Similarity Clusters for the Entities in PDB 5NIV

Entity #1 | Chains: A
Light chain of 5D3 Fab protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 7396
95 % 1 6 7997
90 % 1 15 3359
70 % 41 2399 2
50 % 51 3045 2
40 % 51 3045 2
30 % 111 6183 1
Entity #2 | Chains: B
Heavy chain of 5D3 Fab protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 7066
95 % 1 6 7629
90 % 1 6 7608
70 % 51 2943 1
50 % 58 3094 1
40 % 58 3094 1
30 % 112 6183 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures