5N5O

Structure of SARS coronavirus main protease in complex with the alpha-ketoamide (S)-N-benzyl-3-((S)-2-cinnamamido-3-cyclopropylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide (Cinnamoyl-cyclopropylalanine-GlnLactam-CO-CO-NH-benzyl)


Sequence Similarity Clusters for the Entities in PDB 5N5O

Entity #1 | Chains: A
Replicase polyprotein 1ab protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 64 490
95 % 107 177 219 Flexibility: Low
Max RMSD: 16.9, Avg RMSD: 2.1
PDBFlex
90 % 107 177 228
70 % 107 177 254
50 % 119 195 206
40 % 124 217 181
30 % 124 217 190

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures