Sequence Similarity Clusters for the Entities in PDB 5MPL

Entity #1 | Chains: A
Heterogeneous nuclear ribonucleoprotein A1 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69404
95 % 1 1 56237
90 % 1 1 53003
70 % 1 1 46237
50 % 1 1 39866
40 % 3 3 20372
30 % 3 3 18243
Entity #2 | Chains: B
RNA UCAGUU rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures