Sequence Similarity Clusters for the Entities in PDB 5MIO

Entity #1 | Chains: A
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 120 164 42
95 % 126 256 12 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 126 257 15
70 % 128 272 13
50 % 128 272 18
40 % 256 544 4
30 % 259 553 8
Entity #2 | Chains: B
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 101 110 171
95 % 126 252 13 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 127 264 8
70 % 129 272 12
50 % 129 272 17
40 % 257 544 4
30 % 260 553 8
Entity #3 | Chains: C
Kinesin-like protein KIF2C,KIF2C FUSED TO A DARPIN,KIF2C FUSED TO A DARPIN protein, length: 573 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 88163
95 % 1 1 61313
90 % 1 1 57785
70 % 1 1 50210
50 % 1 1 43279
40 % 1 1 39096
30 % 1 1 34413

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures