5MF0

Crystal structure of Smad4-MH1 bound to the GGCCG site.


Sequence Similarity Clusters for the Entities in PDB 5MF0

Entity #1 | Chains: A,B
MH1 domain of human Smad4 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 9767
95 % 4 4 10351
90 % 4 4 10247
70 % 5 5 8743
50 % 5 5 8195
40 % 5 5 7544
30 % 5 5 7203
Entity #2 | Chains: E,F
DNA (5'-D(P*AP*CP*GP*GP*GP*CP*CP*GP*CP*GP*GP*CP*CP*CP*GP*T)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures