Sequence Similarity Clusters for the Entities in PDB 5MED

Entity #1 | Chains: A,B
Arachidonate 15-lipoxygenase protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20252
95 % 1 4 10017 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 4 9467
70 % 1 4 9215
50 % 1 4 8587
40 % 1 4 8210
30 % 1 4 7658

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures