Sequence Similarity Clusters for the Entities in PDB 5M72

Entity #1 | Chains: A
Signal recognition particle subunit SRP72 protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 10697
95 % 1 3 11285 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 1 3 11173
70 % 1 3 10678
50 % 1 3 9842
40 % 1 3 9419
30 % 1 3 8628
Entity #2 | Chains: B
Signal recognition particle subunit SRP68 protein, length: 71 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72331
95 % 1 1 44488
90 % 1 1 48960
70 % 1 1 37318
50 % 1 1 32346
40 % 1 1 29281
30 % 1 1 25894

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures