Sequence Similarity Clusters for the Entities in PDB 5M4J

Entity #1 | Chains: A,B
Xaa-Pro dipeptidase protein, length: 484 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 11510
95 % 8 16 2211 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.9
PDBFlex
90 % 8 16 2178
70 % 8 16 2252
50 % 8 16 2375
40 % 8 16 2396
30 % 9 46 810

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures