Sequence Similarity Clusters for the Entities in PDB 5LQB

Entity #1 | Chains: A
Interleukin-2 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 31673
95 % 1 21 1207 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 1 21 1225
70 % 2 22 1201
50 % 2 22 1235
40 % 2 22 1285
30 % 2 22 1325
Entity #2 | Chains: H
anti-hIL2 FAB fragment heavy chain protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66636
95 % 1 1 53187
90 % 1 4 20298
70 % 556 2943 1
50 % 590 3094 1
40 % 590 3094 1
30 % 1166 6183 1
Entity #3 | Chains: L
anti-hIL2 FAB fragment light chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66635
95 % 1 13 3660 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.2
PDBFlex
90 % 13 120 152
70 % 457 2399 2
50 % 566 3045 2
40 % 566 3045 2
30 % 1167 6183 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures