Sequence Similarity Clusters for the Entities in PDB 5LKM

Entity #1 | Chains: A,B,C
DNA repair protein RadA protein, length: 452 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29673
95 % 1 1 25129 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.4
PDBFlex
90 % 1 1 24324
70 % 1 1 22796
50 % 1 1 19615
40 % 1 1 18337
30 % 1 1 16456

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures