Sequence Similarity Clusters for the Entities in PDB 5LDT

Entity #1 | Chains: A,B,C
MOMP porin protein, length: 405 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22183
95 % 2 2 21382 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 2 20843
70 % 2 2 19231
50 % 2 2 17071
40 % 2 2 15789
30 % 2 2 14261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5LDV 1 A MOMP porin 197
2 5LDT 1 A, B, C MOMP porin 197