Sequence Similarity Clusters for the Entities in PDB 5LDT

Entity #1 | Chains: A,B,C
MOMP porin protein, length: 405 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22023
95 % 2 2 19735 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 2 18748
70 % 2 2 19076
50 % 2 2 15639
40 % 2 2 15712
30 % 2 2 14203

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures