Sequence Similarity Clusters for the Entities in PDB 5L9B

Entity #1 | Chains: A,B
Egl nine homolog 1 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 34975
95 % 16 32 1787 Flexibility: Low
Max RMSD: 8.3, Avg RMSD: 1.9
PDBFlex
90 % 16 32 1828
70 % 18 35 1730
50 % 18 36 1729
40 % 18 36 1780
30 % 18 36 1799
Entity #2 | Chains: C,D
Hypoxia-inducible factor 1-alpha protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures