Sequence Similarity Clusters for the Entities in PDB 5KHY

Entity #1 | Chains: A
Polyubiquitin-B protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 86014
95 % 368 485 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 376 498 6
70 % 423 548 9
50 % 433 563 11
40 % 433 567 14
30 % 443 583 20
Entity #2 | Chains: B
Polyubiquitin-B protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 298 387 4
95 % 369 485 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 377 498 6
70 % 424 548 9
50 % 434 563 11
40 % 434 567 14
30 % 444 583 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures