Sequence Similarity Clusters for the Entities in PDB 5K14

Entity #1 | Chains: A
HIV-1 reverse transcriptase(isolate HXB2) protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 62 635
95 % 52 291 110 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.7
PDBFlex
90 % 52 291 115
70 % 52 291 125
50 % 53 292 149
40 % 53 293 164
30 % 53 293 167
Entity #2 | Chains: B
HIV-1 reverse transcriptase (isolate LW123) protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 58 806
95 % 52 285 116 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 52 285 122
70 % 52 285 129
50 % 53 286 155
40 % 53 287 170
30 % 53 287 174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures