Sequence Similarity Clusters for the Entities in PDB 5JR7

Entity #1 | Chains: A,C
cAMP-dependent protein kinase catalytic subunit alpha protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 63 65 573
95 % 289 292 118 Flexibility: Low
Max RMSD: 5.7, Avg RMSD: 1.0
PDBFlex
90 % 292 295 123
70 % 292 295 130
50 % 292 295 157
40 % 292 295 172
30 % 293 296 175
Entity #2 | Chains: B,D
cAMP-dependent protein kinase type I-alpha regulatory subunit protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 9896
95 % 8 8 8098 Flexibility: Medium
Max RMSD: 15.2, Avg RMSD: 8.2
PDBFlex
90 % 8 8 8047
70 % 8 8 7840
50 % 8 8 7389
40 % 12 12 4953
30 % 15 15 3626

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures