Sequence Similarity Clusters for the Entities in PDB 5J6P

Entity #1 | Chains: A,B,C
Kinetochore protein mis18 protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28705
95 % 1 1 24420 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 1 23656
70 % 1 1 21723
50 % 1 1 19100
40 % 1 1 17486
30 % 1 1 15657

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures