Sequence Similarity Clusters for the Entities in PDB 5IT2

Entity #1 | Chains: H
heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60817
95 % 1 1 50250
90 % 6 38 1291
70 % 198 2969 1
50 % 215 3121 1
40 % 215 3121 1
30 % 420 6236 1
Entity #2 | Chains: L
light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60815
95 % 10 220 74 Flexibility: Low
Max RMSD: 7.7, Avg RMSD: 2.3
PDBFlex
90 % 49 797 2
70 % 157 2418 2
50 % 200 3071 2
40 % 200 3071 2
30 % 421 6236 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5IT2 1 H heavy chain 9606