Sequence Similarity Clusters for the Entities in PDB 5IT2

Entity #1 | Chains: H
heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60817
95 % 1 1 50250
90 % 6 38 1291
70 % 198 2969 1
50 % 215 3121 1
40 % 215 3121 1
30 % 420 6236 1
Entity #2 | Chains: L
light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60815
95 % 10 220 74 Flexibility: Low
Max RMSD: 7.7, Avg RMSD: 2.3
PDBFlex
90 % 49 797 2
70 % 157 2418 2
50 % 200 3071 2
40 % 200 3071 2
30 % 421 6236 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2VXV 1 H HUMAN IGG ABT-325 9606
2 5WK2 2 H M116 HEAVY CHAIN FD 9606
3 5I1K 2 H FAB HEAVY CHAIN 9606
4 5W05 2 H M59 FAB HEAVY CHAIN FD 10090
5 4HPO 1 H CH58 Fab heavy chain 9606
6 5IT2 1 H heavy chain 9606
7 5IBU 2 G, H 6652 Heavy Chain 9606
8 2XWT 1 A THYROID BLOCKING HUMAN AUTOANTIBODY K1-70 HEAVY CHAIN FAB FRAGMENT HEAVY CHAIN, RESIDUES 1-229 9606
9 5WK3 2 Q, S, U, W M116 HEAVY CHAIN FD 9606
10 3UJJ 2 H Fab region of the heavy chain of anti-HIV-1 V3 monoclonal antibody 4025 9606
11 4M6N 2 H CNTO1959 heavy chain FD 9606
12 5I1L 2 B, H FAB HEAVY CHAIN 9606
13 4M6M 2 H CNTO1959 heavy chain FD 9606
14 5Y11 1 A MAb 4-5 heavy chain 9606
15 4KMT 2 H heavy chain 5-51/CNTO888/IGG1 Fab 9606
16 5ZV3 2 H Heavy chain of antibody CBTAU28.1 9606
17 4RIS 2 H CH58-UA Fab heavy chain 9606
18 6FY2 1 H, X CAP228-16H Heavy Chain 9606
19 5MVZ 1 A, H Fab 4AB007 H-chain 9606
20 4QXG 1 H Fab, heavy chain, IgG1 Fab, heavy chain 9606
21 4HWE 1 H Fab heavy chain heavy chain 9606
22 4HQQ 1 H CH58 Fab heavy chain 9606
23 5TZ2 1 H C47B222 Fab Heavy Chain 9606
24 5I1J 2 H FAB HEAVY CHAIN 9606
25 4ZD3 1 H 679-14-14E06 Fab fragment heavy chain 9606
26 5IBT 1 H UCA Heavy Chain 9606
27 5W06 3 H M1587 FAB HEAVY CHAIN FD 10090
28 4HWB 2 H Fab heavy chain 9606
29 6FY0 1 H, I CAP228-16H Heavy Chain 9606
30 4RIR 1 A, H CH58-UA Fab heavy chain 9606
31 6FY3 1 H, X CAP228-3D Heavy Chain 9606
32 4NP4 2 H, I bezlotoxumab heavy chain 9606
33 6MI2 1 A, D Utomilumab Fab heavy chain 9606
34 3HMX 4 H USTEKINUMAB FAB HEAVY CHAIN 9606
35 6GK8 1 H HUMAN FAB ANTIBODY FRAGMENT OF CBTAU-28.1(S32R;E35K) 9606
36 3HMW 2 H USTEKINUMAB FAB HEAVY CHAIN 9606
37 6FY1 1 H, Y CAP228-16H Heavy Chain 9606
38 5IBL 3 C, H 6639 Heavy Chain 9606