Sequence Similarity Clusters for the Entities in PDB 5IT2

Entity #1 | Chains: H
heavy chain protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60556
95 % 1 1 49998
90 % 6 38 1278
70 % 193 2943 1
50 % 210 3094 1
40 % 210 3094 1
30 % 410 6183 1
Entity #2 | Chains: L
light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67162
95 % 9 212 79 Flexibility: Low
Max RMSD: 7.7, Avg RMSD: 2.3
PDBFlex
90 % 44 784 2
70 % 152 2399 2
50 % 195 3045 2
40 % 195 3045 2
30 % 411 6183 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures