Sequence Similarity Clusters for the Entities in PDB 5IRE

Entity #1 | Chains: A,C,E
E protein protein, length: 504 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 4180
95 % 5 5 4518
90 % 5 5 4561
70 % 5 5 4454
50 % 8 22 923
40 % 10 24 850
30 % 10 24 851
Entity #2 | Chains: B,D,F
M protein protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 4181
95 % 5 5 4519
90 % 5 5 4562
70 % 5 5 4455
50 % 5 5 4279
40 % 8 19 1085
30 % 10 21 959

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures