Sequence Similarity Clusters for the Entities in PDB 5IIS

Entity #1 | Chains: A
Serine/threonine-protein kinase pim-1 protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 111 325
95 % 20 83 636 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 20 82 676
70 % 43 154 339
50 % 43 156 389
40 % 43 156 414
30 % 43 156 421

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures