Sequence Similarity Clusters for the Entities in PDB 5II4

Entity #1 | Chains: A
Maltose-binding periplasmic protein,Vitelline envelope sperm lysin receptor protein, length: 517 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 84085
95 % 2 2 34062 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 34617
70 % 92 216 88
50 % 92 216 120
40 % 92 216 140
30 % 101 227 141

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures